Identification of genes required for the fitness of Rhodococcus equi during the infection of mice via signature-tagged transposon mutagenesis

Rhodococcus equi is a Gram-positive facultative intracellular bacterium that causes pyogranulomatous pneumonia in foals and immunocompromised people. In the present study, signature-tagged transposon mutagenesis was applied for the negative selection of R. equi mutants that cannot survive in vivo. Twenty-five distinguishable plasmid-transposon (plasposon) vectors by polymerase chain reaction (PCR), each containing a unique oligonucleotide tag, were constructed and used to select the transposon mutants that have in vivo fitness defects using a mouse systemic infection model. Of the 4,560 transposon mutants, 102 mutants were isolated via a real-time PCR-based screening as the mutants were unable to survive in the mouse model. Finally, 50 single transposon insertion sites were determined via the self-cloning strategy. The insertion of the transposon was seen on the virulence plasmid in 15 of the 50 mutants, whereas the remaining 35 mutants had the insertion of transposon on the chromosome. The chromosomal mutants contained transposon insertions in genes involved in cellular metabolism, DNA repair and recombination, gene regulation, non-ribosomal peptide synthesis, and unknown functions. Additionally, seven of the chromosomal mutants showed a reduced ability to multiply in the macrophages in vitro. In this study, we have identified several biosynthetic pathways as fitness factors associated with the growth within macrophages and survival in mice.     

Local convergence zones or discontinuous lines in the Taklimakan Desert, Northwest China

In order to study convergence zones or discontinuous lines formed locally in the Taklimakan Desert,we analyzed available MODIS images onboad TERRA or AQUA satellite for ten cases:29 March 2002,14 April 2002;2 January 2003;21 April 2003;26 March 2004;28 April 2004;30 January 2005;25 June 2005;3 December 2005;and 26 July 2006.We used weather maps published by the Japan Mete-orological Agency for the Asia and Pacific region at 500 hPa,700 hPa and 850 hPa,at 00Z and 12Z to analyze the meteorological conditions occurring in each case.We estimated the positions of air streams,convergence zones or discontinuous lines between them,and thermal conditions on the maps and con-firmed the presence of cumulus and cumulonimbus clouds through satellite images in particular.After a review of previous studies,this paper introduced the results of the present study.Closed warm areas in the Taklimakan Desert and on the Tibetan Plateau and local convergence zones or discontinuous lines in the Taklimakan Desert were discussed together with their diurnal changes,using composite maps of the ten cases.Along the long axis of the desert the convergence zones or discontinuous lines normally extend 70-80 km in a west-east direction,but are suspected to exceed 100 km in extreme cases.On the other hand,the convergence zones or discontinuous lines extending in a north-south direction on the southern fringe of the desert have a length of 40-60 km.The closed warm areas show clear diurnal changes,but they were not detected at the 500 hPa level.An example of a clear convergence zone running in a north-south direction on 26 July 2006 was presented in detail with corresponding satellite images.     

Retrospective study on the outcomes and risk factors of right paramedian abomasopexy for right abomasal disorders in 47 dairy cows

Very few epidemiologic studies have verified the utility of the right paramedian abomasopexy (RPA) technique in cows with right abomasal disorders. This study aimed to investigate the outcomes and risk factors for non-survival in the herd within 30 days of surgery in cows with right abomasal disorders who underwent the RPA technique. Forty-seven Holstein cows with right abomasal disorders (25 with right abomasal displacement [RDA] and 22 with right abomasal volvulus [RAV]) were included. Twenty-two cows with RDA (22/25, 88.0%) and 10 cows with RAV (10/22, 45.5%) survived at 30 days post-surgery. Multivariate logistic regression analysis indicated that hyponatremia, hypokalemia, and the presence of abomasal volvulus were the major risk factors associated with non-survival.     

Possible conservation units of the sun bear (Helarctos malayanus) in Sarawak based on variation of mtDNA control region

The mitochondrial DNA control region of the sun bear (Helarctos malayanus) was sequenced using 21 DNA samples collected from confiscated sun bears to identify conservation units, such as evolutionarily significant units and management units, in Sarawak, Borneo Island. A total of 10 haplotypes were observed, indicating the presence of at least two lineages in the sun bear population in Sarawak. Presumably, these two lineages could represent evolutionarily significant units. However, the geographical distributions of the two lineages remained unknown due to the lack of information regarding the exact capture locations of the confiscated sun bears. It is essential to elucidate the geographical distributions of these lineages in order to create a proper conservation plan for the sun bears in Sarawak. Therefore, further studies examining the haplotype distributions using DNA samples from known localities are essential.